Topics tagged nf-core

Topic	Replies	Views	Activity
Using a program to pre-process the samplesheet Ask for help nf-core	4	52	October 9, 2024
RNA-Seq pipeline fails early Ask for help nextflow , nf-core , google-cloud	3	89	October 8, 2024
I am trying to run ampliseq pipline on nf tower Ask for help nextflow , tower , nf-core , platform	1	33	October 7, 2024
Pipeline getting frozen (nf-core) Ask for help nextflow , nf-core	3	212	September 2, 2024
Google Batch - Stub Run not working Ask for help nf-core , azure-batch , google-cloud , platform	0	139	February 29, 2024
Increasing allocation for running on google cloud Ask for help nextflow , nf-core	12	60	August 20, 2024
Nextflow run stopped for uknown reason Ask for help nf-core	2	82	August 20, 2024
Problem with disk space when running on nf tower Ask for help nextflow , tower , nf-core , platform	3	193	August 19, 2024
Is the parallelization working properly? Ask for help nextflow , nf-core	2	46	August 9, 2024
Starting Nextflow in a singularity container and use it to run another singularity container Ask for help nextflow , nf-core	0	114	July 12, 2024
Nextflow Error Ask for help nextflow , nf-core , google-cloud , platform	5	379	July 1, 2024
Applied training: configuration of nf-core pipelines Ask for help nf-core , training	1	44	June 27, 2024
Is there any comprehensive tutorial on config files/options and how to use them? Ask for help config , nf-core	1	104	June 10, 2024
How to deal with ambguous outputs of a command-line process? Ask for help nextflow , nf-core	3	108	June 5, 2024
Dealing with executable docker image Ask for help nextflow , nf-core	4	314	May 29, 2024
How to see echo results in .command.out to debug a pipeline? Ask for help nextflow , nf-core	2	100	May 28, 2024
Cutandrun pipeline help :( Ask for help nextflow , nf-core	7	258	April 22, 2024
March 2025 nf-core hackathon Events nf-core	0	163	April 18, 2024
Nf-core/pangenome aws-megatests fail - maybe because of fusion or wave? Ask for help fusion , aws , nf-core	4	179	March 1, 2024
multiMap doesn't work in our pipeline with NXF 24.01.0-edge Ask for help nextflow , nf-core	3	180	February 13, 2024
Issue with the test that is using latest Nextflow version Ask for help nf-core	2	169	February 8, 2024
Nf-core Hackathon - March 2024 Events nf-core	0	248	January 17, 2024
Nf-core modules best practice Ask for help nf-core	6	434	February 13, 2024
Downstream processing from nf-core/rnaseq before ML analysis Ask for help nf-core	1	295	December 18, 2023
Issue with nf-core/taxprofiler Pipeline Stuck in Runnable Status on AWS Batch Ask for help nextflow , nf-core	1	281	December 4, 2023