|
About the Tips & Tricks category
|
|
0
|
223
|
October 2, 2023
|
|
Cleaning output directory when workflow fails
|
|
0
|
314
|
January 3, 2024
|
|
Get first N elements from a channel
|
|
0
|
307
|
October 2, 2023
|
|
Nf-test: Get the relative paths of all files in a pipeline output folder
|
|
0
|
272
|
March 28, 2024
|
|
Running a Nextflow pipeline from a Git repository: Setting defaults
|
|
3
|
414
|
October 1, 2024
|
|
Enabling resume for specific processes
|
|
0
|
276
|
March 4, 2024
|
|
Skipping processes in an nf-core pipeline
|
|
0
|
357
|
January 18, 2024
|
|
Remove channel entries using a keys/entries from another channel
|
|
0
|
162
|
March 14, 2024
|
|
Collecting channel entries consisting of tuples and sending it to a process
|
|
0
|
188
|
March 21, 2024
|
|
Nf-test: Capture all process/workflow outputs without capturing md5sums of files in snapshots
|
|
0
|
177
|
March 28, 2024
|
|
Using a launch script to run nextflow
|
|
0
|
55
|
December 12, 2024
|
|
Native Terminal Notifications on Pipeline completion
|
|
2
|
61
|
November 6, 2024
|
|
Connecting / Chaining existing Nextflow workflows in a meta workflow
|
|
1
|
103
|
July 25, 2024
|
|
Getting the file baseName depending on the file extension
|
|
2
|
691
|
April 3, 2024
|
|
Turn on printing of all executed bash commands and disable deleting temp folder in work folder
|
|
2
|
151
|
March 6, 2024
|
|
Checking the error output of ignored tasks
|
|
2
|
296
|
February 10, 2024
|
|
Group tuples based on two meta map keys, and sort based on another one
|
|
0
|
384
|
October 2, 2023
|
|
Composing strings based on multiple conditions
|
|
0
|
36
|
February 27, 2025
|
|
Divide-and-conquer strategy to call problematic regions
|
|
0
|
29
|
February 11, 2025
|
|
Prevent nextflow from running a process if the output file exists
|
|
1
|
45
|
February 8, 2025
|
|
Handling Unordered CSV
|
|
0
|
26
|
January 26, 2025
|
|
How to set docker sudo in Nextflow for your containers
|
|
1
|
63
|
October 11, 2024
|
|
Minimally Reproducible Conda Set Up For Nextflow
|
|
1
|
41
|
October 11, 2024
|
|
Source another R script in the `bin/` directory
|
|
1
|
141
|
August 8, 2024
|
|
Adding resourceLabels per project and sampe from a config file
|
|
0
|
104
|
May 30, 2024
|
|
Escaping strings to prevent unexpected interpolation or code injection
|
|
2
|
143
|
March 26, 2024
|