Topics tagged aws

Topic	Replies	Views	Activity
Seqera cloud pipeline gets stuck in runnable Ask for help nextflow , aws , ampliseq	4	108	August 29, 2025
Setting ephemeral storage in AWS fargate Ask for help nextflow , aws	1	16	August 22, 2025
Automatic vs. manual IAM policies for S3 bucket read/write Ask for help aws , documentation , platform	7	270	July 24, 2025
Triggering nextflow pipeline using API call Ask for help nextflow , tower , aws	3	32	May 12, 2025
Issues with fusion Ask for help nextflow , fusion , aws	0	27	April 24, 2025
Nf- core/sarek on aws batch error Ask for help nextflow , aws	2	61	April 15, 2025
Pipeline not working in AWS Batch because of a fusion problem Ask for help fusion , aws , platform	6	70	April 21, 2025
AWS Batch job stuck at runnable when using a compute environment that would enable use of a GPU (A10) -> which next step to take? Ask for help aws , config , gpu	3	241	March 27, 2025
Libz.so missing for AWS CLI in AWS batch tasks Ask for help nextflow , aws	4	91	March 18, 2025
Nfcore/rnaseq pipeline never finishes Ask for help aws , nf-core , platform	2	65	March 13, 2025
Upload to aws s3 fails Ask for help aws , nf-core	0	14	March 8, 2025
Unable to run the submitted job through AWS batch with Seqera listed firewall configuration IP Ask for help aws , platform	3	48	March 4, 2025
Problem with upload nf-core output on minio server Ask for help aws , nf-core	0	46	February 28, 2025
Help with Optimizing Nextflow Pipeline for Large Datasets Ask for help nextflow , aws	1	122	February 24, 2025
aws.batch.maxParallelTransfers Documentation Question Ask for help nextflow , aws	3	46	February 8, 2025
CannotInspectContainerError when launching jobs from localhost to run on AWS Batch Ask for help nextflow , aws	9	53	February 7, 2025
How does aws.batch.maxSpotAttempts work? Ask for help nextflow , aws	1	55	February 4, 2025
AWS Batch: Spot Instance - How does Nextflow log an interruption? Ask for help nextflow , aws	4	138	February 4, 2025
Unable to Acquire Lock on Session - Already Moved /work Directory Ask for help nextflow , aws , nf-core , ampliseq , platform	0	70	February 3, 2025
AWS Batch - migration to graviton - implications on wave performance Ask for help nextflow , wave , aws	3	49	December 12, 2024
Applying tags to output files in subdirectories on S3 Ask for help nextflow , aws	0	20	December 10, 2024
Pipeline completes on AWS batch but one process didn't complete and no errors Ask for help nextflow , aws	0	19	November 27, 2024
RNAseq pipeline not terminating Ask for help nextflow , aws	4	81	November 20, 2024
Read & Write to 2 different S3 buckets Ask for help nextflow , aws	2	120	November 17, 2024
Using 2 AWS Batch Compute Environments within a single pipeline Ask for help nextflow , aws , platform	3	84	November 22, 2024
Cannot add credentials for ECR container registry Ask for help wave , aws , platform	3	66	November 15, 2024
Reading an input file from a public-only S3 bucket Ask for help nextflow , aws	1	64	November 15, 2024
AccessDeniedException with docker + slurm on AWS Ask for help nextflow , aws , slurm	1	70	November 15, 2024
Frequently failing runs using AWS Batch Spot Ask for help aws , platform	1	54	November 15, 2024
Aws command not found error Ask for help aws	1	71	October 21, 2024