Topics tagged aws

Topic	Replies	Views	Activity
Seqera cloud pipeline gets stuck in runnable Ask for help ampliseq , aws , nextflow	3	94	July 12, 2025
Triggering nextflow pipeline using API call Ask for help tower , aws , nextflow	3	28	May 12, 2025
Issues with fusion Ask for help nextflow , fusion , aws	0	26	April 24, 2025
Nf- core/sarek on aws batch error Ask for help aws , nextflow	2	41	April 15, 2025
Pipeline not working in AWS Batch because of a fusion problem Ask for help fusion , aws , platform	6	62	April 21, 2025
AWS Batch job stuck at runnable when using a compute environment that would enable use of a GPU (A10) -> which next step to take? Ask for help aws , config , gpu	3	215	March 27, 2025
Libz.so missing for AWS CLI in AWS batch tasks Ask for help aws , nextflow	3	68	March 18, 2025
Nfcore/rnaseq pipeline never finishes Ask for help platform , aws , nf-core	2	57	March 13, 2025
Upload to aws s3 fails Ask for help aws , nf-core	0	13	March 8, 2025
Unable to run the submitted job through AWS batch with Seqera listed firewall configuration IP Ask for help platform , aws	3	48	March 4, 2025
Problem with upload nf-core output on minio server Ask for help aws , nf-core	0	41	February 28, 2025
Help with Optimizing Nextflow Pipeline for Large Datasets Ask for help nextflow , aws	1	106	February 24, 2025
aws.batch.maxParallelTransfers Documentation Question Ask for help aws , nextflow	3	41	February 8, 2025
CannotInspectContainerError when launching jobs from localhost to run on AWS Batch Ask for help aws , nextflow	9	45	February 7, 2025
How does aws.batch.maxSpotAttempts work? Ask for help aws , nextflow	1	46	February 4, 2025
AWS Batch: Spot Instance - How does Nextflow log an interruption? Ask for help aws , nextflow	4	107	February 4, 2025
Unable to Acquire Lock on Session - Already Moved /work Directory Ask for help ampliseq , nf-core , platform , aws , nextflow	0	59	February 3, 2025
AWS Batch - migration to graviton - implications on wave performance Ask for help aws , nextflow , wave	3	43	December 12, 2024
Applying tags to output files in subdirectories on S3 Ask for help nextflow , aws	0	15	December 10, 2024
Pipeline completes on AWS batch but one process didn't complete and no errors Ask for help aws , nextflow	0	18	November 27, 2024
RNAseq pipeline not terminating Ask for help aws , nextflow	4	77	November 20, 2024
Read & Write to 2 different S3 buckets Ask for help aws , nextflow	2	118	November 17, 2024
Using 2 AWS Batch Compute Environments within a single pipeline Ask for help nextflow , aws , platform	3	74	November 22, 2024
Cannot add credentials for ECR container registry Ask for help aws , wave , platform	3	57	November 15, 2024
Reading an input file from a public-only S3 bucket Ask for help aws , nextflow	1	53	November 15, 2024
AccessDeniedException with docker + slurm on AWS Ask for help aws , slurm , nextflow	1	65	November 15, 2024
Frequently failing runs using AWS Batch Spot Ask for help platform , aws	1	48	November 15, 2024
Aws command not found error Ask for help aws	1	56	October 21, 2024
Non-aws S3 bucket won't be picked up by nextflow Ask for help nf-core , aws , nextflow	2	37	October 21, 2024
Awscli can't find libz share object file when running nextflow workflow on AWS Batch Ask for help nf-core , aws	2	54	October 12, 2024