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How to unzip and run a process on every output file?
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1
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4
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March 27, 2025
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Nextflow CPU limit does not take effect
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0
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8
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March 25, 2025
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Nextflow 24.10.4 adds unsupported --mkdir flag to mamba create command
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2
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25
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March 24, 2025
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Generating a List of File Paths for Parallel Jobs from output of another process
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7
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18
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March 22, 2025
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Using groovy without bash in process
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4
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15
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March 21, 2025
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Why nextflow overwrite my input?
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5
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22
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March 21, 2025
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Nextflow stalls after version check
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6
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25
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March 19, 2025
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Libz.so missing for AWS CLI in AWS batch tasks
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3
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29
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March 18, 2025
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Nextflow Podcast Ep. 49: Finding novel proteins at Seanome, with Olga Botvinnik
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0
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25
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March 17, 2025
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AliNe: A Flexible and Efficient Nextflow Pipeline for Read Alignment
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0
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10
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March 17, 2025
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Cannot run HiSat2 (nf4-science(rnaseq) training)
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2
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13
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March 15, 2025
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RUNNING of NF-CORE/VIRAL RECON with custom primers, reference sequence and bed files
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1
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8
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March 13, 2025
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Does -resume account for tool version?
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2
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23
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March 12, 2025
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Nextflow pipeline not working any more with Google Batch
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2
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13
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March 12, 2025
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Own variant calling nextflow pipeline - error with Variant Recalibrator. Argument resource is missing
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2
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19
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March 11, 2025
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Nextflow Training Week (2025-Q1)
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6
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2734
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March 9, 2025
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About stage from symbolink path
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0
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7
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March 7, 2025
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Composing strings based on multiple conditions
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0
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42
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February 27, 2025
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Help with process that merges results of previous processes
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2
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30
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February 26, 2025
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Nextflow Training Week Instructions
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1
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443
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February 24, 2025
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Help with Optimizing Nextflow Pipeline for Large Datasets
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1
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36
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February 24, 2025
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General question on cached Nextflow containers
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3
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53
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February 28, 2025
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Fixing error: FastQ file for reads 1 must be provided, cannot contain spaces and must have extension
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5
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44
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February 27, 2025
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Looking for a way to trigger a Nextflow cleanup process (deleting input files) only after the entire workflow completes successfully—any ideas or best practices to handle this efficiently?
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7
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211
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February 18, 2025
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How to setup Nextflow on windows environment?
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3
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43
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February 18, 2025
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Divide-and-conquer strategy to call problematic regions
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0
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32
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February 11, 2025
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Podman Permission Issues on Lifebit Platform
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1
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51
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February 10, 2025
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Nextflow process hangs with no error message
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1
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53
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February 9, 2025
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Failure of fastq validation
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2
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56
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February 9, 2025
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Prevent nextflow from running a process if the output file exists
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1
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49
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February 8, 2025
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