Hi,
I am running a pipeline that consists of Nextflow scripts and shell scripts. When I run it on a VM, it takes around 8 hours to complete, but when I run it in production, it takes approximately 12 hours. Can anyone help me understand why there is a mismatch in execution time?
Moreover, when I run the same sample for the second time on the VM, the execution time is significantly lower—even though I am not using the -resume option. What could be causing such a drastic difference in runtime?