MultiQC on fastp results

I am using multiqc v1.16 for analysing fastp results. Following error was thrown “No analysis results found. Cleaning up…” however, in my present working directory there are 10 json files which are results from fastp tool

Hi @Niharika,

Thanks for posting and welcome to the community forum :slight_smile:

Did you check the MultiQC docs troubleshooting guide already? I’ve tried to document common problems there, so something may ring a bell:

Failing this, would it be possible to attach some logs so that I can try to replicate the problem?

Note that the MultiQC fastp module looks for any files called *.fastp.json (see docs) - you can see the example files that we test with here.


A post was split to a new topic: Fastp: not enough samples showing