Nextflow for proseq

[Taimor_Williams]

Hi Everyone,

I was wondering if there was a nextflow pipeline for proseq? I know about nextflow nascent but it is not working and the slack channel seems dead.

nohup nextflow run nascent -profile test,singularity --outdir test_run
less .nextflow.log
”””
nextflow.exception.AbortOperationException: Project `nf-core/nascent` is currently stuck on revision: main – you need to explicitly specify a revision with the option `-r` in order to use it
”””

best,

Taimor Williams

[yinshiyi (Shiyi Yin)]

@Taimor_Williams

nf-core/nascent

Could you try

nohup nextflow run nf-core/nascent -r 2.3.0 -profile test,singularity --outdir test_run 

[Taimor_Williams]

@Taimor_Williams

”””
nextflow.exception.AbortOperationException: Project nf-core/nascent is currently stuck on revision: main – you need to explicitly specify a revision with the option -r in order to use it
”””

Hi Shiyi,

It worked! Thank you so much!

best,

Taimor