I have an issue getting a container “pip::demuxalot-0.4.3” from Seqera containers. The build fails due to an error with compiling pysam. However, I have no issues building a container with just pysam, both from conda and pip (I can also manually build the conda container including just demuxalot from the same conda lockfile) I’m attaching the relevant conda lockfile and build log.
Is there a way to fix this with Seqera containers or should I just switch to a local conda environment?
demuxalot043_build_log.txt (17.1 KB)
demuxalot043_docker_def.txt (478 Bytes)
demuxalot043_conda.txt (88 Bytes)