Single Seqera container failing to build

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1

I have an issue getting a container “pip::demuxalot-0.4.3” from Seqera containers. The build fails due to an error with compiling pysam. However, I have no issues building a container with just pysam, both from conda and pip (I can also manually build the conda container including just demuxalot from the same conda lockfile) I’m attaching the relevant conda lockfile and build log.

Is there a way to fix this with Seqera containers or should I just switch to a local conda environment?

demuxalot043_build_log.txt (17.1 KB)

demuxalot043_docker_def.txt (478 Bytes)

demuxalot043_conda.txt (88 Bytes)

2

Hi @dolgalevgv,

Thank you for bringing this to our attention, and I’m sorry for the trouble you experienced.

I’ve just tested it on our end and everything appears to be working correctly now. It seems it may have been a momentary disruption. Please give it another try with other packages you need and let me know if you run into anything further. We’re happy to help.

I just built pip::demuxalot-0.4.3 in Seqera Containers, as you can see here.