I’m trying to run a Docker image using Nextflow and pass some flags to it such as volume mounts (I must do this for compatibility reasons). I’m following the instructions here: Processes — Nextflow 23.10.0 documentation
I get this error: ERROR ~ No such variable: containerOptions
The .nf file is set up this way:
process my_process {
container 'test_image:latest'
containerOptions '--volume /home/data/db:/home/db'
"""
python3 ./main.py
"""
}
workflow {
my_process()
}
Nextflow is started using this command: nextflow main.nf
I also tried: nextflow main.nf -with-docker test_image