Nextflow Podcast Ep. 50: Imaging pipelines and analysis, with Krešimir Beštak

Hey everyone! :waving_hand:

The Nextflow Podcast is back with a bang for Episode 50! :partying_face: :nextflow: :studio_microphone:

To mark this milestone, I had the pleasure of chatting with the brilliant Krešimir — a rising star in the nf-core community and a PhD student working in spatial omics and microscopy at the University Hospital Heidelberg. :anatomical_heart::microscope:

This one’s a little different to our usual genomics-heavy content — we dive into how Nextflow pipelines are being used for image analysis, why spatial transcriptomics is a game-changer for cardiovascular and cancer research, and what it’s like contributing to nf-core as a student developer. Spoiler: it’s inspiring stuff!

:link: Show notes, transcript, links and more:

:television: The episode premieres on YouTube, Spotify, Apple Podcasts and all the usual places on Friday 4th April at 15:00 CEST / 14:00 UK / 09:00 ET :headphone:

Go give it a listen, and let me know what you think — especially if you’re working on imaging or non-genomics workflows, I’d love to hear from you!

More great episodes coming soon :orange_heart: