Using localstack aws s3 in nextflow

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1

Hello, similarly to the issue reported on I am trying to use S3 of LocalStack with Nextflow but I got runtime error. · nextflow-io/nextflow · Discussion #5181 · GitHub

I’m experiencing issues, accessing aws s3 ran locally on localstack through nextflow.
It should be reachable through the http://localhost:4566 endpoint .

Is this a known issue, is there a way to go around it?
Thank you.

2

Hi @Stefan_Babukov. Welcome to the forum!

Can you confirm it works outside Nextflow? I have seen several complaints on the internet of people running into these erros without Nextflow.

3

Hi, thanks for your reply.
I can confirm localstack endpoint works outside of nextflow, we have been using it for years.