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Error running containerised process if directory path contains spaces and hyphen
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1
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28
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November 21, 2025
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Error Running a workflow
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3
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25
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November 21, 2025
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Job failing in GCP due to no CredetialsProvider
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0
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12
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November 21, 2025
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Manage datasets that are not stored in working directory
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3
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23
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November 28, 2025
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Missing required field on nf-core/sopa
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1
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13
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November 21, 2025
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RUNNING of NF-CORE/VIRAL RECON with custom primers, reference sequence and bed files
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6
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75
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November 19, 2025
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Nf-test installation
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2
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29
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November 19, 2025
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Looking for a way to trigger a Nextflow cleanup process (deleting input files) only after the entire workflow completes successfully—any ideas or best practices to handle this efficiently?
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8
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904
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November 18, 2025
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Zoom for office hours requires passcode i never received
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2
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14
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November 17, 2025
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Alter process output folders for results
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4
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30
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November 14, 2025
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How to deal with optional inputs in a workflow
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5
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192
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November 13, 2025
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Error optional input for process
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1
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24
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November 11, 2025
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Nf-core/scrnaseq running on GPUs
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2
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29
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November 11, 2025
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Data Explorer no longer allowing uploads to S3
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2
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42
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November 10, 2025
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MultiQC with large tables backed by sqlite DBs
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3
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31
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November 5, 2025
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How can I force featureCounts to show number of reads not percent?
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2
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50
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November 5, 2025
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MultiQC fastp module issue with input filenames
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4
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67
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November 5, 2025
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Process already defined: upgrading to 25.10.0 with strict syntax
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6
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61
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November 3, 2025
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Unrecognized config options using strict syntax
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5
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49
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November 3, 2025
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Error when trying to pull container
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2
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63
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October 31, 2025
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Using workflow outputs to publish files from a nested map channel
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3
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38
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November 4, 2025
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Issue running nf-core/rnaseq on SLURM via Seqera Platform — tools not found (exit code 127)
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1
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27
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October 27, 2025
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Running Nextflow entirely from Docker containers
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4
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52
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October 24, 2025
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Caching and resuming to skip one of the parallel jobs
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8
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66
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October 22, 2025
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Wave container failing to build
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1
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41
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October 19, 2025
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My rnaseq pipeline seems to run, but I am not seeing any results folder after running fastqc
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1
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33
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October 19, 2025
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Is there any way to capture the config file inside workflow when passed on command line (pass via -c) option
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1
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34
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October 17, 2025
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Awscli can't find libz share object file when running nextflow workflow on AWS Batch
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3
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109
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October 13, 2025
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UMI-tagged cfDNA sources
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1
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17
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October 13, 2025
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Processes complete but (1) no caching, (2) no publishDir
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4
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38
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October 9, 2025
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